BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB004E03SP1|AL425258
(1036 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig920 1996 0.0
>3x_Contig920
Length = 3306
Score = 1996 bits (1005), Expect = 0.0
Identities = 1032/1039 (99%), Gaps = 3/1039 (0%)
Strand = Plus / Minus
Query: 1 atgacgtaggtttgacccaaacaaacgtgaggwccacagccgaagaccaaccagttcttc 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 2393 atgacgtaggtttgacccaaacaaacgtgaggaccacagccgaagaccaaccagttcttc 2334
Query: 61 tttgcttggttagctgcagatccttcaacccacctttctggaataaattcatctggatct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2333 tttgcttggttagctgcagatccttcaacccacctttctggaataaattcatctggatct 2274
Query: 121 tcgtaaacctctgggtcatgtagagcagggtacaaagttggaatcaacatagaacccttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2273 tcgtaaacctctgggtcatgtagagcagggtacaaagttggaatcaacatagaacccttt 2214
Query: 181 ggagcagagtaagttggaacgacagggaaagacttcttcacatagtatggaaccataatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2213 ggagcagagtaagttggaacgacagggaaagacttcttcacatagtatggaaccataatg 2154
Query: 241 acaggtggcctataacgaagggtttccttaacaaccatgtttgtgtatttcatttcgtca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2153 acaggtggcctataacgaagggtttccttaacaaccatgtttgtgtatttcatttcgtca 2094
Query: 301 atcaaatccatagacaatttgacgtttggatcattgtttctgactcttaattgttcttct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2093 atcaaatccatagacaatttgacgtttggatcattgtttctgactcttaattgttcttct 2034
Query: 361 ctaatatttgccatgacatctggtctatcagcgataatttggaaaatccaacaagccaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2033 ctaatatttgccatgacatctggtctatcagcgataatttggaaaatccaacaagccaaa 1974
Query: 421 gaggaagaagcatcttgagaagcaaacaaaaaggtgaaaattgcttctgacatttctctg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1973 gaggaagaagcatcttgagaagcaaacaaaaaggtgaaaattgcttctgacatttctctg 1914
Query: 481 ttagtgaattctctgtggtacaacttggaatcagcgtcatccttgttcttagcctcatgc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1913 ttagtgaattctctgtggtacaacttggaatcagcgtcatccttgttcttagcctcatgc 1854
Query: 541 atcaaggaacaccaagcatccaacacacaagtactttcaccaccagcagcaatgtggtcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1853 atcaaggaacaccaagcatccaacacacaagtactttcaccaccagcagcaatgtggtcc 1794
Query: 601 ttggccatttgagcacactgttcgaaaattttcatggtcatatcagccgtcttcttaccg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1793 ttggccatttgagcacactgttcgaaaattttcatggtcatatcagccgtcttcttaccg 1734
Query: 661 taccaagtcttggtgtatgkgataataattgggaagttcaccaattccaaagcagcagtg 720
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1733 taccaagtcttggtgtatgggataataattgggaagttcaccaattccaaagcagcagtg 1674
Query: 721 accaaatagtaatcgtcagcaacttttctaatttgatcttcagtaatgtaatcaccacag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1673 accaaatagtaatcgtcagcaacttttctaatttgatcttcagtaatgtaatcaccacag 1614
Query: 781 aaggcctttaaagataaagcacacatgatttctctcatatcgtggaagaaaacacgagcc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1613 aaggcctttaaagataaagcacacatgatttctctcatatcgtggaagaaaacacgagcc 1554
Query: 841 tcgtacttattttccttggacaattcaatgaatttctcaatgtatttatccatcagcaat 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1553 tcgtacttattttccttggacaattcaatgaatttctcaatgtatttatccatcagcaat 1494
Query: 901 tcttgagaaggcatgtatttgg-caacgcttgcttagtgaacaacccgttcaaagaattt 959
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||
Sbjct: 1493 tcttgagaaggcatgtatttggccaacgcttgcttagtgaacaacccgttcaaagatttt 1434
Query: 960 ctgtaat-cacatgttctttaccatccaaaaacacccaattgcttggtcttaagatctta 1018
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1433 ctgtaatccacatgttctttaccatccaaaaacacccaattgcttggtcttaagatctta 1374
Query: 1019 actgc-acgtcaacgamac 1036
||||| |||||||||| ||
Sbjct: 1373 actgcaacgtcaacgacac 1355
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8302
Number of Sequences: 1807
Number of extensions: 8302
Number of successful extensions: 66
Number of sequences better than 1.0e-20: 1
length of query: 1036
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1020
effective length of database: 10,329,639
effective search space: 10536231780
effective search space used: 10536231780
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)